BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031D01LP1|AL429375
(909 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1779 1764 0.0
>3x_Contig1779
Length = 24855
Score = 1764 bits (884), Expect = 0.0
Identities = 899/908 (99%), Gaps = 1/908 (0%)
Strand = Plus / Plus
Query: 1 attgatcttcgcaacaatttcatcaaatgtcataacacttgtwacgtccacagaaaatag 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 18035 attgatcttcgcaacaatttcatcaaatgtcataacacttgtaacgtccacagaaaatag 18094
Query: 61 gtatctagtgatcttgtttgawattttgcataaacacgctctaaagtagtttaaaatgac 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 18095 gtatctagtgatcttgtttgaaattttgcataaacacgctctaaagtagtttaaaatgac 18154
Query: 121 aggraaataccatgggtttattttcacccaaccaactaccatcgattcatctttcatggc 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18155 aggaaaataccatgggtttattttcacccaaccaactaccatcgattcatctttcatggc 18214
Query: 181 atccacaacattggcatcaggagagcgacttatagggcattccgctttcaaagttttaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18215 atccacaacattggcatcaggagagcgacttatagggcattccgctttcaaagttttaaa 18274
Query: 241 atagtttctcccgaatgatactgacatatcagattcatcaataattggaggtttccccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18275 atagtttctcccgaatgatactgacatatcagattcatcaataattggaggtttccccaa 18334
Query: 301 tgtcatcgatagatttgagtyatttaagtwacaatagagccatatcgatcttatttgtda 360
|||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |
Sbjct: 18335 tgtcatcgatagatttgagtcatttaagtaacaatagagccatatcgatcttatttgtaa 18394
Query: 361 gadatcttctcttggcaggtgattaaagttatccaagtagcaaagttcaagatctcttgc 420
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18395 gaaatcttctcttggcaggtgattaaagttatccaagtagcaaagttcaagatctcttgc 18454
Query: 421 aaatttcacagctacaacgaaaatgttcaatgcagcttccgttgaaacgcaggatctgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18455 aaatttcacagctacaacgaaaatgttcaatgcagcttccgttgaaacgcaggatctgat 18514
Query: 481 atacgagtagagtagtaagagagcttgaactgaaagaaggccctcacatactaaagadat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 18515 atacgagtagagtagtaagagagcttgaactgaaagaaggccctcacatactaaagaaat 18574
Query: 541 tttatggtagtagaaaagactgttttgataacagtcattttcaatttggaaaagcttttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18575 tttatggtagtagaaaagactgttttgataacagtcattttcaatttggaaaagcttttc 18634
Query: 601 cggagtaaaatcaagcttatcctttctataatggttagattccattaaagaatgtctagc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18635 cggagtaaaatcaagcttatcctttctataatggttagattccattaaagaatgtctagc 18694
Query: 661 atacaacgaacctaaggatagcagaatgttgacaatcaaatgttccgaatatgatatttc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18695 atacaacgaacctaaggatagcagaatgttgacaatcaaatgttccgaatatgatatttc 18754
Query: 721 ttcagctttggaagaaaaatacttctcaaaaattttctgacatgcctttggttcaatgac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18755 ttcagctttggaagaaaaatacttctcaaaaattttctgacatgcctttggttcaatgac 18814
Query: 781 attcaagtcctctgccgataataggctatagtaagtctccataattctttgacacctaat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18815 attcaagtcctctgccgataataggctatagtaagtctccataattctttgacacctaat 18874
Query: 841 cgagtccggaattggaagcaattgagattcgtcggatatatttttta-caaacgtttcat 899
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 18875 cgagtccggaattggaagcaattgagattcgtcggatatattttttaccaaacgtttcat 18934
Query: 900 ttgaatga 907
||||||||
Sbjct: 18935 ttgaatga 18942
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7273
Number of Sequences: 1807
Number of extensions: 7273
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 909
length of database: 10,358,551
effective HSP length: 16
effective length of query: 893
effective length of database: 10,329,639
effective search space: 9224367627
effective search space used: 9224367627
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)